libpappsomspp
Library for mass spectrometry
obochooserwidget.cpp
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1/**
2 * \file pappsomspp/widget/obo/obochooserwidget/obochooserwidget.cpp
3 * \date 19/04/2021
4 * \author Olivier Langella
5 * \brief display obo term list and choose items
6 */
7
8
9/*******************************************************************************
10 * Copyright (c) 2021 Olivier Langella
11 *<Olivier.Langella@universite-paris-saclay.fr>.
12 *
13 * This file is part of the PAPPSOms++ library.
14 *
15 * PAPPSOms++ is free software: you can redistribute it and/or modify
16 * it under the terms of the GNU General Public License as published by
17 * the Free Software Foundation, either version 3 of the License, or
18 * (at your option) any later version.
19 *
20 * PAPPSOms++ is distributed in the hope that it will be useful,
21 * but WITHOUT ANY WARRANTY; without even the implied warranty of
22 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
23 * GNU General Public License for more details.
24 *
25 * You should have received a copy of the GNU General Public License
26 * along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
27 *
28 ******************************************************************************/
29
30#include "obochooserwidget.h"
31
32#include "ui_uiobochooserwidget.h"
33#include "../../../exception/exceptionnotfound.h"
34#include <QDebug>
35
36using namespace pappso;
37
38OboChooserWidget::OboChooserWidget(QWidget *parent)
39 : QWidget(parent), ui(new Ui::OboChooserWidgetForm)
40{
41 qDebug();
42 ui->setupUi(this);
43
44
45 connect(ui->oboListWidget,
47 ui->oboTermForm,
49}
50
52{
53 delete ui;
54}
55
56bool
58{
59 return ui->oboTermForm->isOboTerm();
60}
61
64{
65 if(ui->oboTermForm->isOboTerm())
66 {
67 }
68 else
69 {
70 throw pappso::ExceptionNotFound(tr("OBO term not available"));
71 }
72 return ui->oboTermForm->getOboPsiModTerm();
73}
74
75void
77{
78 qDebug();
79 ui->oboListWidget->filterMzPrecision(target_mz,
80 ui->oboListWidget->getPrecisionPtr());
81}
82
83void
85{
86 ui->oboListWidget->filterMzPrecision(ui->oboListWidget->getMzTarget(),
87 precision);
88}
void setPrecision(PrecisionPtr precision)
set mz precision to filter among possible modifications
Ui::OboChooserWidgetForm * ui
void setMzTarget(double target_mz)
set mz target to filter among possible modifications
const OboPsiModTerm & getOboPsiModTermSelected() const
get the selected obo term or an exception
bool isOboTermSelected() const
tells if an OBO term has been selected
void oboTermChanged(OboPsiModTerm oboTerm) const
void displayOboTerm(OboPsiModTerm oboTerm)
Definition: obotermform.cpp:59
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition: aa.cpp:39
display obo term list and choose items